Installation

We recommend to set up a virtual environment using Conda. The graph-based visualizations require Graphviz, which is automatically installed with PyGraphviz through conda.

conda create --name colosseum
conda activate colosseum
conda install --channel conda-forge pygraphviz
pip install git+https://github.com/MichelangeloConserva/Colosseum

If you prefer to use a Python virtual environment, you need to install Graphviz separately.

python3 -m venv colosseum
source colosseum/bin/activate

# Ubuntu and Debian 
# sudo apt-get install graphviz graphviz-dev

# Fedora and Red Hat
# sudo dnf install graphviz graphviz-devel

# MacOS
# brew install graphviz

pip install git+https://github.com/MichelangeloConserva/Colosseum

We refer to the PyGraphviz installation tutorial for installation of Graphviz in WIndows.